math: add mathjax rendering #235

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Sören Weber 2022-07-02 14:00:23 +02:00
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113 changed files with 2382 additions and 16 deletions

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@ -25,6 +25,7 @@ The theme is a fork of the great [Learn theme](https://github.com/matcornic/hugo
- Syntax highlighting
- Attachments files
- List child pages
- Math and chemical formulae using the MathJax library
- Mermaid diagrams for flowcharts, sequences, gantts, pie, etc.
- Swagger UI for OpenAPI Specifications
- Customizable look and feel

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@ -31,6 +31,7 @@ See [what's new]({{% relref "basics/migration" %}}) within the latest update.
- [Syntax highlighting]({{%relref "cont/syntaxhighlight" %}})
- [Attachments files]({{%relref "shortcodes/attachments" %}})
- [List child pages]({{%relref "shortcodes/children" %}})
- Math and chemical [formulae]({{%relref "shortcodes/math" %}}) using the MathJax library
- [Mermaid diagrams]({{%relref "shortcodes/mermaid" %}}) for flowcharts, sequences, gantts, pie, etc.
- [Swagger UI]({{%relref "shortcodes/swagger" %}}) for OpenAPI Specifications
- [Customizable look and feel]({{%relref "basics/customization"%}})

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@ -49,6 +49,12 @@ Note that some of these parameters are explained in details in other sections of
disableBreadcrumb = true
# If set to true, hide table of contents menu in the header of all pages
disableToc = false
# If set to false, load the MathJax module on every page regardless if a MathJax shortcode is present
disableMathJax = false
# Specifies the remote location of the MathJax js
customMathJaxURL = "https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"
# Initialization parameter for MathJax, see MathJax documentation
mathJaxInitialize = "{}"
# If set to false, load the Mermaid module on every page regardless if a Mermaid shortcode or Mermaid codefence is present
disableMermaid = false
# Specifies the remote location of the Mermaid js
@ -118,14 +124,27 @@ This will add a little printer icon in the top bar. It will switch the page to p
While colors of your chosen color variant are reset to the theme's light standard values for printing, this does not apply for Mermaid diagrams and Swagger/OpenAPI Specification. Those will still use the colors of your chosen color variant which may cause a non coherent look on paper.
{{% /notice %}}
## MathJax
The MathJax configuration parameters can also be set on a specific page. In this case, the global parameter would be overwritten by the local one. See [Math]({{< relref "shortcodes/math" >}}) for additional documentation.
### Example {#math-example}
MathJax is globally disabled. By default it won't be loaded by any page.
On page "Physics" you coded some JavaScript for a dynamic formulae. You can set the MathJax parameters locally to load mathJax on this page.
You also can disable MathJax for specific pages while globally enabled.
## Mermaid
The Mermaid configuration parameters can also be set on a specific page. In this case, the global parameter would be overwritten by the local one. See [Mermaid]({{< relref "shortcodes/mermaid" >}}) for additional documentation.
> Example:
>
> Mermaid is globally disabled. By default it won't be loaded by any page.
> On page "Architecture" you need a class diagram. You can set the Mermaid parameters locally to only load mermaid on this page (not on the others).
### Example {#mermaid-example}
Mermaid is globally disabled. By default it won't be loaded by any page.
On page "Architecture" you coded some JavaScript to dynamically generate a class diagram. You can set the Mermaid parameters locally to load mermaid on this page.
You also can disable Mermaid for specific pages while globally enabled.

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@ -14,6 +14,10 @@ This document shows you what's new in the latest release. For a detailed list of
---
## 4.3.0
- **New**: The new shortcode `math` is available to add beatiful math and chemical formulae. See the [documentation]({{% relref "shortcodes/math" %}}) for available features. This feature will not work with Internet Explorer 11.
## 4.2.0
- **Breaking**: The second parameter for the [`include` shortcode]({{% relref "shortcodes/tabs" %}}) was switched in meaning and was renamed from `showfirstheading` to `hidefirstheading`. If you haven't used this parameter in your shortcode, the default behavior hasn't changed and you don't need to change anything.

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@ -20,6 +20,7 @@ Many thanks to [Andy Miller](https://github.com/rhukster) for initially creating
* [jQuery](https://jquery.com) - The "Write less, do more" JavaScript library
* [jquery-svg-zoom-pan](https://github.com/DanielHoffmann/jquery-svg-pan-zoom) - A jQuery plugin to enable pan and zoom in SVG images
* [Lunr](https://lunrjs.com) - Enables a great search experience without the need for external, server-side, search services
* [MathJax](https://mathjax.org/) - Beautiful math and chemical formulae in all browsers
* [Mermaid](https://mermaid-js.github.io/mermaid) - Generation of diagram and flowchart from text in a similar manner as markdown
* [Perfect Scrollbar](https://perfectscrollbar.com) - A minimalistic but perfect custom scrollbar plugin
* [RapiDoc](https://mrin9.github.io/RapiDoc) - Create beautiful, customizable, interactive API documentation from OpenAPI Specifications

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@ -0,0 +1,151 @@
+++
description = "Beautiful math and chemical formulae"
title = "Math"
+++
The `math` shortcode generates beautiful formatted math and chemical formulae using the [MathJax](https://mathjax.org/) library.
{{< math >}}
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
{{< /math >}}
{{% notice note %}}
This only works in modern browsers.
{{% /notice %}}
## Usage
While the examples are using shortcodes with named parameter it is recommended to use codefences instead. This is because more and more other software supports Mermaid codefences (eg. GitHub) and so your markdown becomes more portable.
You are free to also call this shortcode from your own partials.
{{% notice note %}}
To use codefence syntax you have to turn off `guessSyntax` for the `markup.highlight` setting ([see the configuration section](#configuration)).
{{% /notice %}}
{{< tabs groupId="shortcode-parameter">}}
{{% tab name="codefence" %}}
````md
```math
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
```
````
{{% /tab %}}
{{% tab name="shortcode" %}}
````go
{{</* math */>}}
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
{{</* /math */>}}
````
{{% /tab %}}
{{% tab name="partial" %}}
````go
{{ partial "shortcodes/math.html" (dict
"context" .
"content" "$$left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$"
)}}
````
{{% /tab %}}
{{< /tabs >}}
### Parameter
Parameter are only supported when using shortcode or partial syntax. Defaults are used when using codefence syntax.
| Name | Default | Notes |
|:----------------------|:-----------------|:------------|
| **align** | `center` | Allowed values are `left`, `center` or `right`. |
| _**&lt;content&gt;**_ | _&lt;empty&gt;_ | Your formuale. |
## Configuration
MathJax is configured with default settings. You can customize MathJax's default settings for all of your files thru a JSON object in your `config.toml` or override these settings per page thru your pages frontmatter.
The JSON object of your `config.toml` / frontmatter is forwarded into MathJax's configuration object.
See [MathJax documentation](https://docs.mathjax.org/en/latest/options/index.html) for all allowed settings.
{{% notice note %}}
To use codefence syntax you have to turn off `guessSyntax` for the `markup.highlight` setting.
{{% /notice %}}
### Global Configuration File
````toml
[params]
mathJaxInitialize = "{ \"chtml\": { \"displayAlign\": \"left\" } }"
[markup]
[markup.highlight]
# if `guessSyntax = true`, there will be no unstyled code even if no language
# was given BUT mermaid and math codefences will not work anymore! So this is a
# mandatory setting for your site if you want to use math codefences
guessSyntax = false
````
### Page's Frontmatter
````toml
+++
mathJaxInitialize = "{ \"chtml\": { \"displayAlign\": \"left\" } }"
+++
````
## Examples
### Inline Math
````md
Inline math is generated if you use a single `$` as a delimiter around your formulae: {{</* math */>}}$\sqrt{3}${{</* /math */>}}
````
Inline math is generated if you use a single `$` as a delimiter around your formulae: {{< math >}}$\sqrt{3}${{< /math >}}
### Blocklevel Math with Left Alignment
````md
If you delimit your formulae by two consecutive `$$` it generates a new block.
{{</* math align="left" */>}}
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
{{</* /math */>}}
````
If you delimit your formulae by two consecutive `$$` it generates a new block.
{{< math align="left" >}}
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
{{< /math >}}
### Codefence
You can also use codefences but without further parameter.
````md
```math
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
```
````
````math
$$\left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)$$
````
### Chemical formulae
````md
{{</* math */>}}
$$\ce{Hg^2+ ->[I-] HgI2 ->[I-] [Hg^{II}I4]^2-}$$
{{</* /math */>}}
`````
{{< math >}}
$$\ce{Hg^2+ ->[I-] HgI2 ->[I-] [Hg^{II}I4]^2-}$$
{{< /math >}}

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@ -0,0 +1,5 @@
+++
descrption = "Beaut'fl math and chemical formulae"
title = "Math"
+++
{{< piratify >}}

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@ -0,0 +1,4 @@
{{- partial "shortcodes/math.html" (dict
"context" .
"content" .Inner
) }}

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@ -87,6 +87,7 @@
{{- define "section-print" }}
{{- $currentNode := .currentnode }}
{{- with .sect }}
{{- $currentNode.Page.Store.Set "printHasMathJax" (or ($currentNode.Page.Store.Get "printHasMathJax") (.Page.Store.Get "htmlHasMathJax")) }}
{{- $currentNode.Page.Store.Set "printHasMermaid" (or ($currentNode.Page.Store.Get "printHasMermaid") (.Page.Store.Get "htmlHasMermaid")) }}
{{- $currentNode.Page.Store.Set "printHasSwagger" (or ($currentNode.Page.Store.Get "printHasSwagger") (.Page.Store.Get "htmlHasSwagger")) }}
{{/* if we have a relative link in a print page, our print URL is one level to deep; so we are making it absolute to our page by prepending the page's permalink */}}

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@ -7,6 +7,47 @@
<script src="{{"js/clipboard.min.js" | relURL}}{{ if not .Site.Params.disableAssetsBusting }}?{{ now.Unix }}{{ end }}"></script>
<script src="{{"js/perfect-scrollbar.min.js" | relURL}}{{ if not .Site.Params.disableAssetsBusting }}?{{ now.Unix }}{{ end }}"></script>
<script src="{{"js/featherlight.min.js" | relURL}}{{ if not .Site.Params.disableAssetsBusting }}?{{ now.Unix }}{{ end }}"></script>
{{- $wantsMathJax := or (and (eq (.Scratch.Get "relearnOutputFormat") "HTML") (.Page.Store.Get "htmlHasMathJax")) (and (eq (.Scratch.Get "relearnOutputFormat") "PRINT") (.Page.Store.Get "printHasMathJax")) }}
{{- if $wantsMathJax }}
{{- if isset .Params "mathjaxinitialize" }}
{{- $.Scratch.Set "mathJaxInitialize" .Params.mathJaxInitialize }}
{{- else if isset .Site.Params "mathjaxinitialize" }}
{{- $.Scratch.Set "mathJaxInitialize" .Site.Params.mathJaxInitialize }}
{{- else }}
{{- $.Scratch.Set "mathJaxInitialize" "{}" }}
{{- end }}
<script>
function useMathJax( config ){
window.MathJax = Object.assign({
loader: {
load: ['[tex]/mhchem']
},
startup: {
elements: [
'.math'
]
},
tex: {
inlineMath: [
['$', '$'], // allow for single dollars as we set startup.elements
['\\(', '\\)']
]
},
options: {
enableMenu: false // avoid translation hassle for context menu
}
}, config );
}
useMathJax( JSON.parse({{ $.Scratch.Get "mathJaxInitialize" }}) );
</script>
{{- if isset .Params "custommathjaxurl" }}
<script id="MathJax-script" async src="{{ .Params.customMathJaxURL }}"></script>
{{- else if isset .Site.Params "custommathjaxurl" }}
<script id="MathJax-script" async src="{{ .Site.Params.customMathJaxURL }}"></script>
{{- else }}
<script id="MathJax-script" async src="{{"js/mathjax/tex-mml-chtml.js" | relURL}}{{ if not .Site.Params.disableAssetsBusting }}?{{ now.Unix }}{{ end }}"></script>
{{- end }}
{{- end }}
{{- $wantsMermaid := or (and (eq (.Scratch.Get "relearnOutputFormat") "HTML") (.Page.Store.Get "htmlHasMermaid")) (and (eq (.Scratch.Get "relearnOutputFormat") "PRINT") (.Page.Store.Get "printHasMermaid")) }}
{{- if $wantsMermaid }}
<script src="{{"js/jquery.svg.pan.zoom.js" | relURL}}{{ if not .Site.Params.disableAssetsBusting }}?{{ now.Unix }}{{ end }}"></script>

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@ -6,6 +6,10 @@
{{- $currentNode.Scratch.Delete "relearnIsHiddenNode" }}{{/* the node itself is flagged as hidden */}}
{{- $currentNode.Scratch.Delete "relearnIsHiddenStem" }}{{/* the node or one of its parents is flagged as hidden */}}
{{- $currentNode.Scratch.Delete "relearnIsHiddenFrom" }}{{/* the node is hidden from the current page */}}
{{- $wantsMathjax := or (and (ne $currentNode.Params.disableMathjax nil) (not $currentNode.Params.disableMathjax)) (and (ne .Site.Params.disableMathjax nil) (not .Site.Params.disableMathjax)) }}
{{- if $wantsMathjax }}
{{- $currentNode.Page.Store.Set "htmlHasMathjax" true }}
{{- end }}
{{- $wantsMermaid := or (and (ne $currentNode.Params.disableMermaid nil) (not $currentNode.Params.disableMermaid)) (and (ne .Site.Params.disableMermaid nil) (not .Site.Params.disableMermaid)) }}
{{- if $wantsMermaid }}
{{- $currentNode.Page.Store.Set "htmlHasMermaid" true }}

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@ -0,0 +1,9 @@
{{- $context := .context }}
{{- $content := .content }}
{{- $align := .align | default "center" }}
{{- with $context }}
<span class="math align-{{ $align }}">
{{- $content | safeHTML -}}
</span>
{{- .Page.Store.Set "htmlHasMathJax" true }}
{{- end }}

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@ -0,0 +1,6 @@
{{- $_hugo_config := `{ "version": 1 }` }}
{{- partial "shortcodes/math.html" (dict
"context" .
"content" .Inner
"align" (.Get "align")
) }}

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@ -104,7 +104,7 @@ th {
max-width: 300px;
position: fixed;
width: 300px;
z-index: 310;
z-index: 80;
}
#header-wrapper {
@ -170,7 +170,7 @@ th {
flex: 1; /* fill rest of vertical space */
overflow: hidden;
position: relative; /* PS */
z-index: 410;
z-index: 100;
}
#sidebar a.padding {
@ -332,7 +332,7 @@ th {
overflow-wrap: break-word; /* avoid x-scrolling of body if it is to large to fit */
position: relative; /* PS */
width: calc( 100% - 300px);
z-index: 300;
z-index: 70;
}
#body img,
@ -656,7 +656,7 @@ td {
text-transform: none;
white-space: pre;
word-wrap: break-word;
z-index: 450;
z-index: 140;
}
.tooltipped:before {
@ -668,7 +668,7 @@ td {
pointer-events: none;
position: absolute;
width: 0;
z-index: 460;
z-index: 150;
}
.tooltipped:hover:before,
@ -788,7 +788,7 @@ td {
#topbar {
min-height: 3rem;
position: relative;
z-index: 480;
z-index: 170;
}
#topbar > div {
@ -931,7 +931,7 @@ span.nav i{
}
.mobile-support.sidebar-flyout #sidebar {
left: 0;
z-index: 400;
z-index: 90;
}
.mobile-support.sidebar-flyout #body {
margin-left: 230px;
@ -945,7 +945,7 @@ span.nav i{
position: absolute;
right: 0;
top: 0;
z-index: 500;
z-index: 190;
}
}
@ -1141,7 +1141,7 @@ option {
position: absolute;
right: 0;
top: 0;
z-index: 470;
z-index: 160;
}
.progress {
@ -1152,7 +1152,7 @@ option {
overflow: hidden;
position: absolute;
width: 0;
z-index: 490;
z-index: 180;
}
.toc-flyout .progress {
@ -1424,3 +1424,15 @@ input[type="search"]::-webkit-search-results-decoration { display: none; }
#sidebar .collapsible-menu input.toggle:checked + label + a + ul {
display: inline;
}
.math.align-center > mjx-container{
text-align: center !important;
}
.math.align-left > mjx-container{
text-align: left !important;
}
.math.align-right > mjx-container{
text-align: right !important;
}

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@ -0,0 +1 @@
!function(){"use strict";var t,a,o={669:function(t,a,o){Object.defineProperty(a,"__esModule",{value:!0}),a.ActionConfiguration=a.ActionMethods=void 0;var e=o(251),n=o(193),i=o(871),r=o(360);a.ActionMethods={},a.ActionMethods.Macro=r.default.Macro,a.ActionMethods.Toggle=function(t,a){for(var o,e=[];"\\endtoggle"!==(o=t.GetArgument(a));)e.push(new n.default(o,t.stack.env,t.configuration).mml());t.Push(t.create("node","maction",e,{actiontype:"toggle"}))},a.ActionMethods.Mathtip=function(t,a){var o=t.ParseArg(a),e=t.ParseArg(a);t.Push(t.create("node","maction",[o,e],{actiontype:"tooltip"}))},new i.CommandMap("action-macros",{toggle:"Toggle",mathtip:"Mathtip",texttip:["Macro","\\mathtip{#1}{\\text{#2}}",2]},a.ActionMethods),a.ActionConfiguration=e.Configuration.create("action",{handler:{macro:["action-macros"]}})},955:function(t,a){MathJax._.components.global.isObject,MathJax._.components.global.combineConfig,MathJax._.components.global.combineDefaults,a.r8=MathJax._.components.global.combineWithMathJax,MathJax._.components.global.MathJax},251:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.Configuration=MathJax._.input.tex.Configuration.Configuration,a.ConfigurationHandler=MathJax._.input.tex.Configuration.ConfigurationHandler,a.ParserConfiguration=MathJax._.input.tex.Configuration.ParserConfiguration},871:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.AbstractSymbolMap=MathJax._.input.tex.SymbolMap.AbstractSymbolMap,a.RegExpMap=MathJax._.input.tex.SymbolMap.RegExpMap,a.AbstractParseMap=MathJax._.input.tex.SymbolMap.AbstractParseMap,a.CharacterMap=MathJax._.input.tex.SymbolMap.CharacterMap,a.DelimiterMap=MathJax._.input.tex.SymbolMap.DelimiterMap,a.MacroMap=MathJax._.input.tex.SymbolMap.MacroMap,a.CommandMap=MathJax._.input.tex.SymbolMap.CommandMap,a.EnvironmentMap=MathJax._.input.tex.SymbolMap.EnvironmentMap},193:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.default=MathJax._.input.tex.TexParser.default},360:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.default=MathJax._.input.tex.base.BaseMethods.default}},e={};function n(t){var a=e[t];if(void 0!==a)return a.exports;var i=e[t]={exports:{}};return o[t](i,i.exports,n),i.exports}t=n(955),a=n(669),(0,t.r8)({_:{input:{tex:{action:{ActionConfiguration:a}}}}})}();

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@ -0,0 +1 @@
!function(){"use strict";var t,a,e={133:function(t,a,e){Object.defineProperty(a,"__esModule",{value:!0}),a.BboxConfiguration=a.BboxMethods=void 0;var o=e(251),n=e(871),i=e(402);a.BboxMethods={},a.BboxMethods.BBox=function(t,a){for(var e,o,n,u=t.GetBrackets(a,""),l=t.ParseArg(a),x=u.split(/,/),M=0,c=x.length;M<c;M++){var s=x[M].trim(),f=s.match(/^(\.\d+|\d+(\.\d*)?)(pt|em|ex|mu|px|in|cm|mm)$/);if(f){if(e)throw new i.default("MultipleBBoxProperty","%1 specified twice in %2","Padding",a);var d=p(f[1]+f[3]);d&&(e={height:"+"+d,depth:"+"+d,lspace:d,width:"+"+2*parseInt(f[1],10)+f[3]})}else if(s.match(/^([a-z0-9]+|\#[0-9a-f]{6}|\#[0-9a-f]{3})$/i)){if(o)throw new i.default("MultipleBBoxProperty","%1 specified twice in %2","Background",a);o=s}else if(s.match(/^[-a-z]+:/i)){if(n)throw new i.default("MultipleBBoxProperty","%1 specified twice in %2","Style",a);n=r(s)}else if(""!==s)throw new i.default("InvalidBBoxProperty",'"%1" doesn\'t look like a color, a padding dimension, or a style',s)}e&&(l=t.create("node","mpadded",[l],e)),(o||n)&&(e={},o&&Object.assign(e,{mathbackground:o}),n&&Object.assign(e,{style:n}),l=t.create("node","mstyle",[l],e)),t.Push(l)};var r=function(t){return t},p=function(t){return t};new n.CommandMap("bbox",{bbox:"BBox"},a.BboxMethods),a.BboxConfiguration=o.Configuration.create("bbox",{handler:{macro:["bbox"]}})},955:function(t,a){MathJax._.components.global.isObject,MathJax._.components.global.combineConfig,MathJax._.components.global.combineDefaults,a.r8=MathJax._.components.global.combineWithMathJax,MathJax._.components.global.MathJax},251:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.Configuration=MathJax._.input.tex.Configuration.Configuration,a.ConfigurationHandler=MathJax._.input.tex.Configuration.ConfigurationHandler,a.ParserConfiguration=MathJax._.input.tex.Configuration.ParserConfiguration},871:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.AbstractSymbolMap=MathJax._.input.tex.SymbolMap.AbstractSymbolMap,a.RegExpMap=MathJax._.input.tex.SymbolMap.RegExpMap,a.AbstractParseMap=MathJax._.input.tex.SymbolMap.AbstractParseMap,a.CharacterMap=MathJax._.input.tex.SymbolMap.CharacterMap,a.DelimiterMap=MathJax._.input.tex.SymbolMap.DelimiterMap,a.MacroMap=MathJax._.input.tex.SymbolMap.MacroMap,a.CommandMap=MathJax._.input.tex.SymbolMap.CommandMap,a.EnvironmentMap=MathJax._.input.tex.SymbolMap.EnvironmentMap},402:function(t,a){Object.defineProperty(a,"__esModule",{value:!0}),a.default=MathJax._.input.tex.TexError.default}},o={};function n(t){var a=o[t];if(void 0!==a)return a.exports;var i=o[t]={exports:{}};return e[t](i,i.exports,n),i.exports}t=n(955),a=n(133),(0,t.r8)({_:{input:{tex:{bbox:{BboxConfiguration:a}}}}})}();

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